xgxr: Exploratory Graphics for Pharmacometrics
Supports a structured approach for exploring PKPD data <https://opensource.nibr.com/xgx/>. It also contains helper functions for enabling the modeler to follow best R practices (by appending the program name, figure name location, and draft status to each plot). In addition, it enables the modeler to follow best graphical practices (by providing a theme that reduces chart ink, and by providing time-scale, log-scale, and reverse-log-transform-scale functions for more readable axes). Finally, it provides some data checking and summarizing functions for rapidly exploring pharmacokinetics and pharmacodynamics (PKPD) datasets.
| Version: | 1.1.2 |
| Depends: | R (≥ 3.5.0) |
| Imports: | assertthat, binom, Deriv, DescTools, dplyr, ggplot2, glue, graphics, grDevices, gtable, Hmisc, labeling, magrittr, minpack.lm, pander, png, RCurl, readr, scales, stats, stringr, tibble, utils |
| Suggests: | caTools, gridExtra, knitr, pkgdown, rmarkdown, testthat, tidyr |
| Published: | 2023-03-22 |
| DOI: | 10.32614/CRAN.package.xgxr |
| Author: | Andrew Stein [aut, cre],
Alison Margolskee [aut],
Fariba Khanshan [aut],
Konstantin Krismer
 [aut],
Matthew Fidler
[ctb],
Novartis Pharma AG [cph, fnd] |
| Maintainer: | Andrew Stein <andy.stein at gmail.com> |
| BugReports: | https://github.com/Novartis/xgxr/issues |
| License: | MIT + file LICENSE |
| URL: | https://opensource.nibr.com/xgx/ |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| In views: | Pharmacokinetics |
| CRAN checks: | xgxr results |
Documentation:
| Reference manual: | xgxr.html , xgxr.pdf |
| Vignettes: |
PKPD Single Ascending Dose example (source, R code) PK Exploration with nlmixr dataset for theophylline (source, R code) xgxr Overview (source, R code) |
Downloads:
| Package source: | xgxr_1.1.2.tar.gz |
| Windows binaries: | r-devel: xgxr_1.1.2.zip, r-release: xgxr_1.1.2.zip, r-oldrel: xgxr_1.1.2.zip |
| macOS binaries: | r-release (arm64): xgxr_1.1.2.tgz, r-oldrel (arm64): xgxr_1.1.2.tgz, r-release (x86_64): xgxr_1.1.2.tgz, r-oldrel (x86_64): xgxr_1.1.2.tgz |
| Old sources: | xgxr archive |
Reverse dependencies:
| Reverse imports: | nlmixr2plot |
| Reverse suggests: | BayesERtools, ggPMX, monolix2rx, nlmixr2est, nonmem2rx, rxode2 |
Linking:
Please use the canonical form https://CRAN.R-project.org/package=xgxr to link to this page.