fundiversity 1.1.0
Minor changes
- Change vignette names and indexing so that they are ordered
similarly on the pkgdown website, on CRAN, and using
vignette. Vignettes are renamedfundiversity_X-topic.Rmdbut the overview vignettefundiversity.Rmd.
- Fully replace all URLs still pointing to
https://github.com/bisaloo/fundiversity to
https://github.com/funecology/fundiversity
- Update documentation of fd_*()functions for edge cases
and arguments.
- Fix unuseful argument in
remove_species_without_traits()that would displayFALSEat the end of each message.
- Update parallel vignette with list of parallelizable function at the
top and explain that vignette is pre-computed.
- Update performance/benchmark vignette to reflect actually ran
benchmark in manuscript.
Bug fixes
- Fix a bug in the computation of fd_fdis()because of a
misplaced square. NB: All FDis computation done with it
to this day were wrong.
fundiversity 1.0.0
Internal changes
- Unit tests for non-continuous traits for all functions.
- Correct all URLs of the package
Minor changes
- fundiversity functions now error when used with non-continuous trait
data
- future_apply()and- future_lapply()calls
in- fd_fdis(),- fd_fdiv(),- fd_ric(),- fd_fric_intersect()and- fd_feve()now use- future.globals = FALSE, thus
making the internal code less error-prone and faster in parallel
settings.
Major changes
- Add a vignette on numerical correctness named
correctness, accessible withvignette("correctness", package = "fundiversity").
fundiversity 0.2.1
Internal changes
- Unit tests have been updated to work with testthat 3.1.0
fundiversity 0.2.0
Major changes
- There is a new function fd_fric_intersect()to compute
the intersection of convex hulls across pairs of sites.
- There is a new function fd_fdisto compute Functional
Dispersion FDis.
- fd_fdiv(),- fd_feve(),- fd_fdis(),- fd_fric()can now be computed in
parallel with the future framework.
Please refer to the parallelization
vignette for more information.
- The convex hull computation in fd_fdiv(),fd_fric(), andfd_fric_intersect()is now
cached thanks to the memoise
package to speed up repeated runs. This behavior can be disabled by
runningoptions(fundiversity.memoise = FALSE)at the start
of your R session.
fundiversity 0.0.1
- First CRAN release (01751f1) :tada:!
- Added a NEWS.mdfile to track changes to the
package.