Last updated on 2025-09-17 20:50:06 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.09 | 263.20 | 276.29 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.25 | 221.35 | 231.60 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 309.63 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 408.21 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.34 | 239.71 | 253.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.39 | 239.08 | 253.47 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 174.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 181.00 | 200.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 186.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 273.00 | 297.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/118s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.696, system: 0.089, elapsed: 2.734 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.138, system: 0.258, elapsed: 13.445 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.017, elapsed: 0.362 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.836, system: 0.259, elapsed: 6.071 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.006, elapsed: 0.259 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.575, system: 0.661, elapsed: 23.756 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.580, system: 0.059, elapsed: 2.401 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.752, system: 0.114, elapsed: 11.230 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.013, elapsed: 0.244 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.779, system: 0.230, elapsed: 5.445 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.008, elapsed: 0.194 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.991, system: 0.446, elapsed: 20.286 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.049, elapsed: 1.750 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.183, system: 0.282, elapsed: 11.930 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.019, elapsed: 0.339 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.944, system: 0.304, elapsed: 5.854 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.013, elapsed: 0.287 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.151, system: 0.227, elapsed: 1.072 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.808, system: 0.928, elapsed: 22.053 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.546, system: 0.055, elapsed: 2.029 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.102, system: 0.130, elapsed: 14.493 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.261 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.715, system: 0.174, elapsed: 9.210 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.282 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.317, system: 0.461, elapsed: 16.704 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.694, system: 0.872, elapsed: 43.910 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/117s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.716, system: 0.103, elapsed: 2.083 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.021, system: 0.278, elapsed: 11.165 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.015, elapsed: 0.334 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.695, system: 0.213, elapsed: 6.162 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.004, elapsed: 0.224 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.310, system: 0.642, elapsed: 20.739 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.497, system: 0.041, elapsed: 1.774 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.004, system: 0.127, elapsed: 12.074 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.290 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.650, system: 0.163, elapsed: 6.286 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.005, elapsed: 0.217 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.047, system: 0.371, elapsed: 21.358 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.031, elapsed: 2.066 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.974, system: 0.053, elapsed: 16.609 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.319 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.526, system: 0.153, elapsed: 5.963 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.013, elapsed: 0.263 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.046, system: 0.235, elapsed: 0.991 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.049, system: 0.528, elapsed: 27.233 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.469, system: 0.030, elapsed: 2.211 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.027, system: 0.085, elapsed: 14.113 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.014, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.580, system: 0.163, elapsed: 5.650 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.007, elapsed: 0.288 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.109, system: 0.466, elapsed: 16.566 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.189, system: 0.790, elapsed: 40.136 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64