Last updated on 2025-09-23 08:49:35 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.52 | 248.19 | 261.71 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.14 | 271.97 | 282.11 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 355.03 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.58 | 299.55 | 314.13 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.63 | 254.74 | 270.37 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 177.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 181.00 | 201.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 148.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 242.00 | 265.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/120s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.490, system: 0.044, elapsed: 2.039 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.039, system: 0.101, elapsed: 12.590 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.015, elapsed: 0.300 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.733, system: 0.200, elapsed: 6.023 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.249 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.164, system: 0.390, elapsed: 22.039 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.459, system: 0.036, elapsed: 1.906 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.062, system: 0.135, elapsed: 12.022 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.016, elapsed: 0.400 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.844, system: 0.233, elapsed: 6.844 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.008, elapsed: 0.340 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.258, system: 0.451, elapsed: 22.330 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.588, system: 0.050, elapsed: 4.070 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.324, system: 0.248, elapsed: 15.677 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.016, elapsed: 0.308 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.842, system: 0.257, elapsed: 6.095 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.007, elapsed: 0.220 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.173, system: 0.231, elapsed: 1.571 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.888, system: 0.836, elapsed: 29.174 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.662, system: 0.074, elapsed: 2.920 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.444, system: 0.310, elapsed: 13.182 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.017, elapsed: 0.239 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.822, system: 0.286, elapsed: 5.022 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.007, elapsed: 0.189 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.659, system: 0.808, elapsed: 16.245 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.569, system: 1.544, elapsed: 38.719 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [76s/94s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.479, system: 0.042, elapsed: 1.877 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.913, system: 0.133, elapsed: 12.241 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.014, elapsed: 0.207 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.665, system: 0.225, elapsed: 6.267 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.007, elapsed: 0.320 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.931, system: 0.444, elapsed: 21.647 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.396, system: 0.027, elapsed: 1.518 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 7.841, system: 0.046, elapsed: 8.125 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.174, system: 0.011, elapsed: 0.265 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.446, system: 0.159, elapsed: 4.051 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.239 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 13.536, system: 0.273, elapsed: 15.543 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.464, system: 0.026, elapsed: 1.550 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.179, system: 0.093, elapsed: 9.501 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.015, elapsed: 0.357 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.633, system: 0.224, elapsed: 5.281 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.016, elapsed: 0.267 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.055, system: 0.238, elapsed: 0.941 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.308, system: 0.644, elapsed: 18.747 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.588, system: 0.058, elapsed: 2.224 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.944, system: 0.213, elapsed: 13.112 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.016, elapsed: 0.277 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.433, system: 0.201, elapsed: 4.331 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.004, elapsed: 0.167 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.603, system: 0.577, elapsed: 11.823 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.523, system: 1.105, elapsed: 32.820 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64