Last updated on 2025-11-28 07:48:51 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.46 | 252.28 | 264.74 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.06 | 252.90 | 263.96 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 45.00 | 285.94 | 330.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.60 | 241.19 | 256.79 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 27.00 | 397.00 | 424.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 22.00 | 298.00 | 320.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/306s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.832, system: 0.125, elapsed: 10.418 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.138, system: 0.449, elapsed: 36.647 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.031, elapsed: 0.681 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.456, system: 0.445, elapsed: 16.370 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.013, elapsed: 0.606 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.568, system: 1.566, elapsed: 68.945 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.864, system: 0.139, elapsed: 4.859 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.354, system: 0.583, elapsed: 30.709 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.051, elapsed: 0.837 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.629, system: 0.636, elapsed: 12.766 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.016, elapsed: 0.321 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.991, system: 1.879, elapsed: 52.611 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.084, system: 0.195, elapsed: 6.431 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.265, system: 0.491, elapsed: 36.655 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.039, elapsed: 1.012 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.559, system: 0.562, elapsed: 15.650 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.009, elapsed: 0.536 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.332, system: 0.380, elapsed: 2.880 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.469, system: 2.099, elapsed: 67.130 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.701, system: 0.075, elapsed: 4.460 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.077, system: 0.345, elapsed: 23.472 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.035, elapsed: 0.718 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.363, system: 0.408, elapsed: 10.188 seconds]
Computing values for grid cells...
... done. [user: 0.202, system: 0.022, elapsed: 1.907 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.180, system: 1.406, elapsed: 49.498 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.551, system: 2.565, elapsed: 94.048 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [91s/219s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.739, system: 0.076, elapsed: 5.049 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.090, system: 0.437, elapsed: 24.865 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.030, elapsed: 0.489 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.105, system: 0.308, elapsed: 8.142 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.009, elapsed: 0.382 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.972, system: 1.033, elapsed: 40.927 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.718, system: 0.069, elapsed: 3.790 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.023, system: 0.312, elapsed: 20.377 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.023, elapsed: 0.467 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.312, system: 0.360, elapsed: 11.382 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.009, elapsed: 0.519 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.032, system: 0.884, elapsed: 38.322 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.810, system: 0.089, elapsed: 5.606 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.959, system: 0.301, elapsed: 25.953 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.023, elapsed: 0.410 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.123, system: 0.366, elapsed: 10.236 seconds]
Computing values for grid cells...
... done. [user: 0.200, system: 0.016, elapsed: 0.514 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.156, system: 0.308, elapsed: 1.742 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.174, system: 1.324, elapsed: 46.785 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.828, system: 0.086, elapsed: 4.603 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.813, system: 0.224, elapsed: 25.429 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.019, elapsed: 0.567 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.046, system: 0.330, elapsed: 10.571 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.007, elapsed: 0.345 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.272, system: 0.761, elapsed: 32.687 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.070, system: 1.620, elapsed: 76.372 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64