3d0a8b51d5dd4c4b99f5a0c59f2e47b3 *ChangeLog
5384c9c1b368ca748e87c3a553d05c8c *DESCRIPTION
b9b14a0c2a25b0682a4eb032f35c396c *NAMESPACE
d0f8de405d5a94a68459bdf662d3ee61 *R/RcppExports.R
80d098723330f1b2f0556f4e327ad836 *R/add.leaf.R
00299ca719357b9bfe0b190ce2e7093f *R/compare.fitted.fstats.R
ea1686a3b6793c5b0ad0ef52b36114a6 *R/compute.F4ratio.R
78559b871a31bc2be1e16eefda0fe5e9 *R/compute.fstats.R
8818ac1a76ff2eadde1c12b3fe5af342 *R/compute.pairwiseFST.R
4cb6d3806c49515821d5772f0dd8f948 *R/computeFST.R
97da3467726678c7e36f9d74f926fbe0 *R/countdata.subset.R
e9065f87a575627246022b1fd22a0711 *R/countdata2genobaypass.R
9ae268fe872e841a5ad83e20ee773cbc *R/data.merge.R
21a24978fb7b5c8add9bed5fe2258574 *R/find.tree.popset.R
ab41df2aaeae763897da026cbd5dd3ae *R/fit.graph.R
f77ac7f2f0bcd5cf36e9e2b5de170f9c *R/generate.graph.params.R
90ac9dbba7f8b4d015a14b1f6ef518cf *R/generate.jacknife.blocks.R
e51be93b2582f3adc3aa45229184bd9e *R/genobaypass2countdata.R
91cfeb81ab564e13dc9d1371cb6251b9 *R/genobaypass2pooldata.R
2c23b8871091a8e7b6530bdd9eec8310 *R/genoselestim2pooldata.R
8f182834b59063c1b47ffb147f4d3db0 *R/genotreemix2countdata.R
8a9c589604d79be9047b40ca80beb548 *R/graph.builder.R
888cdefb075ece12e2bd7ca22930b250 *R/graph.params2qpGraphFiles.R
05cca31417a12e925b22b2a7f43e7f40 *R/graph.params2symbolicfstats.R
f0a6815409dd92ba79c7a4e8ce05e640 *R/is.countdata.R
5be690ea5f492a5e7be0b67ca59a3bdf *R/is.fitted.graph.R
7ea54d0db958a5c8c1b9dd6039ee678f *R/is.graph.params.R
cd68d07429c34755376e9054ae8139c6 *R/is.pooldata.R
8000f74e582416e7d7f8fc255330c6b5 *R/make.example.files.R
db87c82d1b745684bc086f4f5ac697c1 *R/out.objects.R
f128df41bd042d119c1c0c445dad91bf *R/plot_fstats.R
b597709ec21c5e812a3e8df94dcda4ea *R/pooldata.subset.R
8f422bf45da7c7e130b1cecb31dd3c24 *R/pooldata2diyabc.R
a70fdf9fad520132faf06f47a2da9097 *R/pooldata2genobaypass.R
7c903f55e9b8f0d300bd640365b0f0ce *R/pooldata2genoselestim.R
0c93c7857b623f0d92cab6b858811fc7 *R/poolfstat-package.R
b199d89f49b0f97f6818bebff8843461 *R/poolify.R
44696321fe117359bf7e8a35ea76c24a *R/popsync2pooldata.R
5b8d6d719b310fc2b014e74884ddf006 *R/randomallele.pca.R
92bcc870506baca09da03b8d85f6459c *R/rooted.njtree.builder.R
240c4bf818328be640ac061bb1a3e7fb *R/sim.readcounts.R
de73c4258f77cf61d0252f878fc4a5a5 *R/sliding.windows.fstat.R
e3766ac2abf3660f40c331a1d5d14890 *R/vcf2pooldata.R
5764a362a816357d99a1283c088bb228 *build/vignette.rds
d7c4a63002e0f7e6930e8714de35840a *inst/CITATION
fbabf191da0f6c0565583ceff32fbf8a *inst/doc/vignette.Rnw
9b763432da1d44f72b859b5cf3ee8c1b *inst/doc/vignette.pdf
639adddc62b922fde532126ca2f32d1c *inst/ex.sync.gz
8ff7d9f354e64f5b79c583986c9cb7e0 *inst/ex.vcf.gz
453218cef6b6b3c7c575c766b39167e5 *man/add.leaf.Rd
d26ece24a762a2512780054d029536c7 *man/bjack_cov.Rd
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3f9d429796c069b79c1ca4b0066b9c40 *man/compute.f4ratio.Rd
2f85fc8b53c02d95903079b31d160b86 *man/compute.fstats.Rd
94e56fbfb489515100ea3da88569dd14 *man/compute.pairwiseFST.Rd
6bd508da4ec595a25e6c2adc5a503ad1 *man/computeFST.Rd
1010bb16a929dd662b3d6d578213a6c2 *man/compute_F3fromF2.Rd
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959f76b173dc3e2f6dac4d462f0ce1e4 *man/compute_F4DfromF2samples.Rd
453c703f08610ec638fbec63281330ff *man/compute_F4fromF2.Rd
ab1eaa8d06150113ff07e6ea5cc2e0c2 *man/compute_F4fromF2samples.Rd
0718f26c8a64aed49d31c8f73b674127 *man/compute_H1.Rd
68aefba9733f7658928c9d120c541207 *man/compute_Q2.Rd
d7006f555fc7a30be9b1f0a5c6e2d01f *man/compute_QmatfromF2samples.Rd
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c3285585c53da4a23944147ed48420c4 *man/compute_snpFstAov.Rd
5aa0f47bb3a392e04c826e38d2b86d82 *man/compute_snpHierFstAov.Rd
8b09810b3b22078acab305db6c88853f *man/compute_snpQ1.Rd
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5a1f8636f6f1cec7a8af6baf4f505e84 *man/compute_snpQ2w.Rd
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946c33e3a2cba99731115ce045993f6f *man/countdata.subset.Rd
991516d610ec82cf1e0c53be2061052f *man/countdata2genobaypass.Rd
768bb51a4964c19a03677717aac9a1db *man/data.merge.Rd
a7375a8fb9a682018a9300ac47e424c8 *man/extract_allele_names.Rd
4774fdb05219475e656b76dc1c1d3498 *man/extract_nonvscan_counts.Rd
ba9583ae7792d178f0ae101d05556063 *man/extract_vscan_counts.Rd
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da26e6ea66a17acb65574956ec34e661 *man/find_indelneighbor_idx.Rd
44bfbb64633532def42a2e8b90be3eca *man/fit.graph.Rd
f56c1c50725edad2cf36ab1ddd1df5bd *man/fitted.graph-class.Rd
9d4b2d1e802b16ecb00d0dace1fef97c *man/fstats-class.Rd
5e077fbb3c284e64693866138ba0ed3a *man/generate.graph.params.Rd
4900d6405dca75fc1ddfe0d3f9820b34 *man/generate.jackknife.blocks.Rd
e2c3431a1cd0960c067fba2f13189ff4 *man/generateF3names.Rd
b13335b982a376e82bef892708bc88a2 *man/generateF4names.Rd
5403384abfbd4223b4bdb9f19c727b14 *man/genobaypass2countdata.Rd
1109e12827331cb65fed56bb12fcd4a5 *man/genobaypass2pooldata.Rd
a1659663f83893bd31a2e9bb01b41514 *man/genoselestim2pooldata.Rd
b581ea2ece8f1c594c908420fe6a9891 *man/genotreemix2countdata.Rd
91310b852a1de6bb7e28b6625bfb2d07 *man/graph.builder.Rd
40064bb6251107900beeff241e22ccf6 *man/graph.params-class.Rd
e9fb0aa48de069e45ad0d0ca8ef8a9fd *man/graph.params2qpGraphFiles.Rd
5f965e2c07db00bc76f90d386a3fc4dd *man/graph.params2symbolic.fstats.Rd
808b9bbe080c6811d449fd9253ee1326 *man/heatmap-pairwisefst-method.Rd
4d0ede3dd8b9d8c1d506a6c265bd79a5 *man/is.countdata.Rd
b1f1db6d626d573832b43d4810f2ce82 *man/is.fitted.graph.Rd
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2e2fec2ecd0869b3a715a5ba29a22cb9 *man/pairwisefst-class.Rd
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0ddd0a718feef78113473bd22d981203 *man/pooldata-class.Rd
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d1b2b033e5c585758393bdfa601a5861 *man/pooldata2diyabc.Rd
03e3828b0391a7ecf281db14c79f00db *man/pooldata2genobaypass.Rd
d89d39af626cc98933a1771dfc2fc769 *man/pooldata2genoselestim.Rd
8d3482674e5c3e03810e4457ad73476c *man/poolfstat.Rd
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3f069f9f5957c9af9491b7c579688853 *man/poppair_idx.Rd
3a9465eb3fa84397ef1aba7560c91b90 *man/popsync2pooldata.Rd
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8b4874f9041aa31c6e42cd577e63961c *man/rooted.njtree.builder.Rd
5ec016849a3a6a76ef29704b8f2c0a65 *man/scan_allele_info.Rd
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4469af410e878e60dbd4a87bd3cc7119 *man/show-fstats-method.Rd
63df2d681cd12e5c394c1935026a8b0c *man/show-graph.params-method.Rd
dc44a0c721e8f8bfa3e2462d3f7df421 *man/show-pairwisefst-method.Rd
38cba55d34edb3d10535316a049d557e *man/show-pooldata-method.Rd
a9dcff6bce6bc9c2d7142b5d5b00eaa7 *man/sim.readcounts.Rd
b8f3649e21d8c760dfc9505ec2d7c23f *man/simureads_mono.Rd
4fc81dc14b8aeebe9fd6b4c8a1a1c444 *man/simureads_poly.Rd
be94944996b9a5dd69f6309e506b7cb9 *man/sliding.windows.fstat.Rd
54d3e9321af1a45ac740541120f0827f *man/vcf2pooldata.Rd
1125319436c78aa4d46664b58dc75b69 *src/RcppExports.cpp
4bb1027b38fba90878bbd0008bfa46b5 *src/extract_counts.cpp
e7a1a2a2edafc465c31ad0fde18bde0d *src/fst_utils.cpp
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84c3b85d986b0d3b0c0385747a7f8cae *src/simulate.readcounts.utils.cpp
5e041b2da2bfe72c2e5502e78cf7225d *vignettes/poolfstat_vignette_6pops.pdf
fbabf191da0f6c0565583ceff32fbf8a *vignettes/vignette.Rnw
