* using log directory 'd:/Rcompile/CRANpkg/local/4.5/delimtools.Rcheck'
* using R version 4.5.2 (2025-10-31 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'delimtools/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'delimtools' version '0.2.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... INFO
Packages suggested but not available for checking: 'bGMYC', 'splits'
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'delimtools' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [2s] OK
* checking whether the package can be loaded with stated dependencies ... [2s] OK
* checking whether the package can be unloaded cleanly ... [2s] OK
* checking whether the namespace can be loaded with stated dependencies ... [2s] OK
* checking whether the namespace can be unloaded cleanly ... [2s] OK
* checking loading without being on the library search path ... [2s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [7s] OK
* checking Rd files ... [1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... INFO
Packages unavailable to check Rd xrefs: 'bGMYC', 'splits'
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... [2s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [24s] ERROR
Running examples in 'delimtools-Ex.R' failed
The error most likely occurred in:

> ### Name: match_ratio
> ### Title: Compute Agreement Between Alternative Species Delimitation
> ###   Partitions
> ### Aliases: match_ratio
> 
> ### ** Examples
> 
> 
> # estimate match ratio statistics
> match_ratio(geophagus_delims)
Error in `purrr::map()`:
ℹ In index: 1.
Caused by error in `dplyr::mutate()`:
ℹ In argument: `n_match = dplyr::if_else(dplyr::pick(2) ==
  dplyr::pick(3), union, 0)`.
Caused by error in `dplyr::if_else()`:
! `condition` must be a logical vector, not a logical matrix.
Backtrace:
     ▆
  1. ├─delimtools::match_ratio(geophagus_delims)
  2. │ ├─dplyr::ungroup(...)
  3. │ ├─dplyr::arrange(...)
  4. │ ├─dplyr::group_by(...)
  5. │ ├─purrr::list_rbind(...)
  6. │ │ └─purrr:::check_list_of_data_frames(x)
  7. │ │   └─vctrs::obj_check_list(x, call = error_call)
  8. │ ├─rlang::set_names(...)
  9. │ └─purrr::map(...)
 10. │   └─purrr:::map_("list", .x, .f, ..., .progress = .progress)
 11. │     ├─purrr:::with_indexed_errors(...)
 12. │     │ └─base::withCallingHandlers(...)
 13. │     ├─purrr:::call_with_cleanup(...)
 14. │     └─delimtools (local) .f(.x[[i]], ...)
 15. │       ├─dplyr::summarise(...)
 16. │       ├─dplyr::mutate(...)
 17. │       └─dplyr:::mutate.data.frame(...)
 18. │         └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
 19. │           ├─base::withCallingHandlers(...)
 20. │           └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
 21. │             └─mask$eval_all_mutate(quo)
 22. │               └─dplyr (local) eval()
 23. ├─dplyr::if_else(...)
 24. │ └─vctrs::vec_if_else(...)
 25. └─rlang::abort(message = message, call = call)
Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [3s] OK
* checking PDF version of manual ... [20s] OK
* checking HTML version of manual ... [7s] OK
* DONE
Status: 1 ERROR