blsd                    Barcode level signal denoising
extractor               Extract reads and output from Kraken
parse_kraken_report     Parse kraken report file
prep_dataset            Prepare kraken report, k-mer statistics, UMI
                        data
remove_contaminants     Identifying contaminants and false positives
                        taxa (cell line quantile test)
slsd                    Sample level signal denoising
taxa_counts             Quantitation of microbes
