FSK_runner              Startup FSK runner
check_manifest_files    Checks that the files defined in the manifest
                        exist
convert_metadata_to_lists
                        Fix the metadat so that it is lists
create_fsk              Creates an FSK model from an existing R script
dataframe_to_list       Converts a dataframe to a list
export_R_model          Functions for exporting the R model of an FSK2R
                        object
export_fsk              Exports an object of FSK class as an .fskx file
export_manifest         Functions for exporting the manifest of an
                        FSK2R object
export_metadata         Function for exporting the metadata of an FSK2R
                        object
export_modelmetadata    Functions for exporting the model metadata of
                        an FSK2R object
export_otherfiles       Export other files
export_packages         Functions for exporting the packages of an
                        FSK2R object
export_readme           Functions for exporting the README of an FSK2R
                        object
export_sbmlModel        Export the model.sbml
export_simulation       Export the sim.sedml
export_visualization    Functions for exporting the visualization
                        script of an FSK2R object
find_packages           Finds where packages are stored
get_background          Returns the background of an FSK object
get_general_info        Returns the general info of an FSK object
get_modelmath           Returns the model math of an FSK object
get_readme              Readme of an FSK object
get_scope               Returns the scope of an FSK object
get_session_info        Extract session information
get_simulations         Returns a summary of the simulations of an FSK
                        object (NULL)
import_fsk              Import an FSK model into R
import_fsk_join         Import of FSK with join node
is.FSK2R                Is it an instance of FSK2R?
is_fsk_with_r           Does the object have an R model?
map_FSK_metadata        Map for the contents of the metadata
map_metadata_xml_template
                        Map between the names used in the template and
                        the xml
metadata_list_to_fsk    From read_fsk_metadata_XX to FSK2R format
n_simuls_fsk            Number of simulations in the FSK2R object
read_R_model            Reads the R model in an FSK model
read_fsk_json_metadata
                        Read the metadata.json file
read_fsk_manifest       Read the manifest of an FSK file and convert it
                        to a data.frame
read_fsk_metadata_excel
                        FSK metadata from local Excel file
read_fsk_model          Read the model.sbml
read_fsk_packages       Read the packages.json
read_fsk_rdf_metadata   Read the metadata.rdf
read_fsk_readme         Read the README file
read_fsk_sim            Read the sim.sedml file
read_other_files        Read "other files"
read_visualization      Reads the visualization script in an FSK model
run_all_simulations     Run every simulation in an FSK object
run_simulation          Run one simulation in an FSK object
set_new_simulation      Define a new simulation in an FSK2R object
set_readme              Readme of an FSK object
update_manifest         Updates the manifest file
